Also, if your internet security app is hampering your Axim's connection to the PC while docked, see this
ActiveSync Firewall Troubleshooting guide.
In sum the author states the following:
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If you are using a firewall in between your desktop and your Pocket PC, Handheld PC, or Palm-size PC, you must allow for Netbios and port 990, 999 and 5679 to use ActiveSync. For a complete list of the ports, please review my Protocols FAQ. I do not recommend opening these ports due to the additional security risk.
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I guess I'd make sure that your Axim's IP address, which is usually something like 169.254.2.x is added to your "safe" list. Excluding it will cause PC-cillin Internet Security to block most communication attempts to and from your PC.